STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDRF1Erythroid differentiation regulatory factor 1. (1235 aa)    
Predicted Functional Partners:
PTGFRN
Prostaglandin F2 receptor negative regulator.
      
 0.495
MCEE
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
      
 0.487
IGSF5
Immunoglobulin superfamily member 5.
      
 0.485
PDCD2L
Pre-rRNA-processing protein TSR4.
      
 0.476
ENSEASP00005031365
annotation not available
      
 0.476
PCDH7
Protocadherin 7.
      
 0.468
PAXIP1
PAX interacting protein 1.
      
 0.463
NCAPD2
Non-SMC condensin I complex subunit D2.
      
 0.445
NCAPH
non-SMC condensin I complex subunit H.
      
 0.414
HIKESHI
Hikeshi, heat shock protein nuclear import factor.
      
 0.414
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.