STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINH1Serpin peptidase inhibitor, clade H, member 1. (536 aa)    
Predicted Functional Partners:
COL1A1
Collagen type I alpha 1 chain.
   
 0.787
CRTAP
Cartilage associated protein.
   
 
 0.732
COL3A1
Collagen type III alpha 1 chain.
   
 0.706
COL4A6
Collagen type IV alpha 6 chain.
   
 0.697
COL5A2
Collagen type V/XI/XXIV/XXVII, alpha.
   
 0.682
COL4A2
Collagen type IV alpha 2 chain.
   
 0.656
COL14A1
Collagen type XIV alpha 1 chain.
   
 0.640
FKBP10
FK506-binding protein 9/10.
   
 
 0.638
BTD
Biotinidase.
    
 
 0.613
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.603
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.