STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP205Nuclear pore complex protein Nup205. (2023 aa)    
Predicted Functional Partners:
NUP93
Nuclear pore complex protein Nup93.
   
 0.999
NUP188
Nuclear pore complex protein Nup188.
   
 0.999
NUP155
Nuclear pore complex protein Nup155.
   
 0.999
NUP85
Nuclear pore complex protein Nup85.
   
 0.998
NUP107
Nuclear pore complex protein Nup107.
   
 0.998
NUP160
Nuclear pore complex protein Nup160.
   
 0.996
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.996
NUP133
Nuclear pore complex protein Nup133.
   
 0.995
NUP54
Nuclear pore complex protein Nup54.
   
 0.995
NUP214
Nuclear pore complex protein Nup214.
   
 0.992
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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