STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC17Tetratricopeptide repeat domain 17. (1181 aa)    
Predicted Functional Partners:
HEATR5B
HEAT repeat containing 5B.
   
  
 0.755
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.750
LYPLAL1
Phospholipase/carboxylesterase.
      
 0.736
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
      
 0.732
GLYATL3
Glycine N-acyltransferase-like protein 3.
      
 0.719
LHFPL6
LHFPL tetraspan subfamily member 6.
      
 0.719
SMIM3
Small integral membrane protein 3.
      
 0.706
FAM174A
Family with sequence similarity 174 member A.
      
 0.700
SLC5A9
Solute carrier family 5 (sodium/glucose cotransporter), member 9.
      
 0.685
CLCA2
Calcium-activated chloride channel regulator 2.
      
 0.678
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.