STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RLBP1Retinaldehyde binding protein 1. (317 aa)    
Predicted Functional Partners:
RDH10
Retinol dehydrogenase 10.
    
 0.923
ENSEASP00005012522
Retinol dehydrogenase 11.
    
 0.914
RDH5
11-cis-retinol dehydrogenase.
    
 0.888
BEST1
Bestrophin 1.
   
  
 0.790
RPE65
Retinoid isomerohydrolase / lutein isomerase.
   
  
 0.771
RDH12
Retinol dehydrogenase 12.
    
 0.724
MERTK
C-mer proto-oncogene tyrosine kinase.
      
 0.707
RHO
Rhodopsin.
   
  
 0.691
LRAT
Lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase).
      
 0.662
RGR
Retinal G protein coupled receptor.
   
  
 0.655
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.