STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRABP1Cellular retinoic acid binding protein 1. (255 aa)    
Predicted Functional Partners:
CYP26A1
Cytochrome P450 family 26 subfamily A.
   
 
 0.657
CYP26B1
Cytochrome P450 family 26 subfamily B.
   
 
 0.527
CYP26C1
Cytochrome P450 family 26 subfamily C member 1.
   
 
 0.505
SLC41A2
Solute carrier family 41 member 2.
      
 0.489
RDH14
Retinol dehydrogenase 14 (all-trans/9-cis/11-cis).
   
 
 0.467
RBP4
Retinol binding protein 4.
   
 
 0.453
RARB
Retinoic acid receptor beta.
    
 0.452
RXRA
Retinoid X receptor alpha.
   
 0.443
METTL7B
Methyltransferase like 7B.
      
 0.414
RARA
Retinoic acid receptor alpha.
    
 0.414
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.