STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain containing 39. (674 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
    
 
 0.935
DNAAF3
Dynein assembly factor 3, axonemal.
      
 0.904
RSPH9
Radial spoke head 9 homolog.
    
 0.868
TTC9C
Tetratricopeptide repeat domain 9C.
    
 0.854
CCDC103
Coiled-coil domain containing 103.
      
 0.845
CCDC65
Coiled-coil domain containing 65.
   
 
 0.824
IFT122
Intraflagellar transport 122.
   
 
 0.819
ENSEASP00005027554
annotation not available
   
    0.792
DNAAF4
Dyslexia susceptibility 1 candidate gene 1 protein.
   
 0.784
SPEF2
Sperm flagellar 2.
   
 0.764
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.