STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM2AV-set and transmembrane domain containing 2A. (243 aa)    
Predicted Functional Partners:
CCN5
WNT1 inducible signaling pathway protein 2.
      
 0.696
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
      
 0.556
SNTN
Sentan, cilia apical structure protein.
      
 0.513
LANCL3
LanC like 3.
      
 0.512
LANCL2
LanC like 2.
      
 0.512
PDZD3
PDZ domain containing 3.
      
 0.508
VOPP1
Vesicular, overexpressed in cancer, prosurvival protein 1.
      
 0.505
ZNF423
Zinc finger protein 423.
      
 0.504
ARHGAP20
Rho GTPase activating protein 20.
      
 0.497
NIPSNAP2
Glioblastoma amplified sequence.
      
 0.485
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.