STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB6Protocadherin beta 6. (794 aa)    
Predicted Functional Partners:
DUOX1
Dual oxidase 1.
    
 
 0.619
KAZN
Kazrin, periplakin interacting protein.
    
 
 0.556
OR5M11
Olfactory receptor 5M11-like.
      
 0.467
UNCX
UNC homeobox.
      
 0.463
SLC9A3R1
Sodium/hydrogen exchange regulatory cofactor NHE-RF1.
    
 0.461
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
     
 0.416
RFX3
Regulatory factor X 1/2/3.
      
 0.407
SERINC2
Serine incorporator 2.
      
 0.400
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.