STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC3Small nuclear RNA activating complex polypeptide 3. (412 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
   
 0.997
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.996
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
    
 0.974
GTF2A2
Transcription initiation factor TFIIA small subunit.
    
  0.916
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.827
GTF2B
General transcription factor IIB.
    
 0.827
GTF2F2
Transcription initiation factor TFIIF subunit beta.
    
  0.801
GTF2F1
General transcription factor IIF subunit 1.
    
  0.797
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.787
ENSEASP00005005754
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.787
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.