STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS3Thrombospondin 2/3/4/5. (956 aa)    
Predicted Functional Partners:
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 
 0.941
ITGAV
Integrin subunit alpha V.
   
 0.938
ITGB3
Integrin subunit beta 3.
    
 0.936
SDC4
Syndecan 4.
     
 0.927
ITGB1
Integrin subunit beta 1.
    
 0.924
ITGA3
Integrin subunit alpha 3.
   
 0.921
SDC1
Syndecan 1.
    
 0.912
CD36
CD36 molecule.
   
 0.908
ITGB5
Integrin subunit beta 5.
    
 0.846
ITGA6
Integrin subunit alpha 6.
   
 0.834
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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