STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX8Sorting nexin 8. (476 aa)    
Predicted Functional Partners:
TMEM203
Transmembrane protein 203.
   
  
 0.955
MSH3
DNA mismatch repair protein MSH3.
   
   0.943
VPS35
Vacuolar protein sorting-associated protein 35.
   
 0.943
SNX5
Sorting nexin-5/6/32.
   
 0.910
VPS29
Vacuolar protein sorting-associated protein 29.
   
 0.910
SNX1
Sorting nexin-1/2.
    
 0.904
SNX2
Sorting nexin-1/2.
    
0.889
VPS26B
Vacuolar protein sorting-associated protein 26.
   
 0.869
VPS26A
Vacuolar protein sorting-associated protein 26.
   
 0.868
SNX3
Sorting nexin-3/12.
    
 0.809
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.