STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRMT6Type I protein arginine methyltransferase. (375 aa)    
Predicted Functional Partners:
PRMT5
Type II protein arginine methyltransferase.
   
 0.889
ENSEASP00005005993
Histone H4-like.
    
 0.768
HDAC1
Histone deacetylase 1/2.
    
 0.745
HDAC2
Histone deacetylase 1/2.
    
 0.698
ENSEASP00005011937
annotation not available
    
 0.698
SIN3A
SIN3 transcription regulator family member A.
    
 0.637
WDR77
Methylosome protein 50.
   
 0.629
RPS2
Small subunit ribosomal protein S2e.
   
 0.626
TDRD3
Tudor domain-containing protein 3.
    
 
 0.621
ENSEASP00005023796
annotation not available
   
 0.601
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.