STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCN2ASodium channel protein type 2 subunit alpha. (2006 aa)    
Predicted Functional Partners:
HCN4
Hyperpolarization activated cyclic nucleotide gated potassium channel 4.
   
 0.918
CALHM1
Calcium homeostasis modulator protein 1.
   
 
 0.902
SCN9A
Sodium voltage-gated channel alpha subunit 9.
  
  
0.901
SCN3A
Sodium voltage-gated channel alpha subunit 3.
  
  
0.901
SCN1B
Sodium voltage-gated channel beta subunit 1.
   
 0.896
UNC79
Unc-79 homolog (C. elegans).
   
 0.887
SCN2B
Sodium voltage-gated channel beta subunit 2.
   
 0.846
SCN3B
Sodium voltage-gated channel beta subunit 3.
   
 0.838
SCN4A
Sodium voltage-gated channel alpha subunit 4.
  
 
0.754
SCN11A
Sodium voltage-gated channel alpha subunit 11.
  
 
0.733
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.