STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD4RNA pseudouridylate synthase domain containing 4. (377 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridylate synthase 7 like.
    
 
 0.832
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.826
NGRN
Neugrin, neurite outgrowth associated.
    
 
 0.802
MRM3
16S rRNA (guanosine(1370)-2'-O)-methyltransferase.
  
 
 0.800
FASTKD2
FAST kinase domain-containing protein 2.
   
 
 0.791
PUS7
Pseudouridylate synthase 7 (putative).
    
 
 0.784
MRM1
21S rRNA (GM2251-2'-O)-methyltransferase.
  
 
 0.781
MRPL47
Large subunit ribosomal protein L47.
    
 
 0.758
MTG1
Mitochondrial ribosome associated GTPase 1.
  
 
 0.756
TRUB2
Mitochondrial mRNA pseudouridine synthase TRUB2.
  
 
 0.739
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.