STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP9Matrix metalloproteinase-9 (gelatinase B). (714 aa)    
Predicted Functional Partners:
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.994
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.991
CD44
CD44 molecule (Indian blood group).
   
 0.975
THBS1
Thrombospondin 1.
   
 0.973
MMP3
Matrix metalloproteinase-3 (stromelysin 1, progelatinase).
   
0.968
MMP1
Matrix metalloproteinase-1 (interstitial collagenase).
   
0.967
SDC1
Syndecan 1.
    
 0.965
HBEGF
Heparin binding EGF like growth factor.
   
 0.956
EDN1
Endothelin 1.
     
 0.950
CDH1
Cadherin 1, type 1, E-cadherin.
     
 0.950
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.