STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA41527.1Uncharacterized conserved protein. (464 aa)    
Predicted Functional Partners:
SEA41616.1
Protein of unknown function.
 
     0.817
SEB16684.1
Arylsulfatase.
 
     0.762
SEB16676.1
Phosphoserine phosphatase.
  
     0.756
SEA96574.1
Hypothetical protein.
 
     0.750
SEA97033.1
Protein of unknown function.
 
     0.720
SEA96617.1
Hypothetical protein.
  
     0.660
SEB16622.1
Oxygen tolerance.
 
     0.638
SEA59326.1
Uncharacterized conserved protein.
 
     0.637
SEB16648.1
Protein of unknown function.
 
     0.590
SEA96600.1
Uncharacterized conserved protein.
 
     0.522
Your Current Organism:
Paraburkholderia sartisoli
NCBI taxonomy Id: 83784
Other names: Burkholderia sartisoli, Burkholderia sartisoli Vanlaere et al. 2008, Burkholderia sp. LMG 22948, Burkholderia sp. R-701, Burkholderia sp. RG6-9, Burkholderia sp. RP007, CCUG 53604, ICMP 13529, LMG 24000, LMG:24000, P. sartisoli, Paraburkholderia sartisoli (Vanlaere et al. 2008) Sawana et al. 2015, strain RP 007, strain RP007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.