STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA24091.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (130 aa)    
Predicted Functional Partners:
SEA63814.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.851
SEA93442.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.851
SEB19566.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.851
SEB16093.1
2,4-dienoyl-CoA reductase.
  
 0.802
SEA24039.1
23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.800
SEA24068.1
Phosphoglycolate phosphatase.
       0.799
SEA24117.1
Protease-4.
 
     0.782
SEB24589.1
Uncharacterized protein.
   
  0.737
SEB19379.1
Respiratory nitrate reductase beta subunit.
  
 
 0.721
SEA93479.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.718
Your Current Organism:
Paraburkholderia sartisoli
NCBI taxonomy Id: 83784
Other names: Burkholderia sartisoli, Burkholderia sartisoli Vanlaere et al. 2008, Burkholderia sp. LMG 22948, Burkholderia sp. R-701, Burkholderia sp. RG6-9, Burkholderia sp. RP007, CCUG 53604, ICMP 13529, LMG 24000, LMG:24000, P. sartisoli, Paraburkholderia sartisoli (Vanlaere et al. 2008) Sawana et al. 2015, strain RP 007, strain RP007
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.