STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA26354.1Amino acid ABC transporter substrate-binding protein, PAAT family. (299 aa)    
Predicted Functional Partners:
SEA71027.1
L-glutamate ABC transporter membrane protein.
 
 0.885
SEA71045.1
L-glutamate ABC transporter membrane protein.
 
  0.868
SEA70997.1
L-glutamate ABC transporter ATP-binding protein.
 
  0.832
SEB21674.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  0.626
SEA09392.1
Hypothetical protein.
   
 0.608
SEA66615.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
  0.589
SEB21681.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
  0.557
SEA66911.1
Cystine transport system ATP-binding protein.
 
  0.554
SEB18938.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
  0.548
SEA21397.1
Chorismate mutase.
     
 0.544
Your Current Organism:
Paraburkholderia sartisoli
NCBI taxonomy Id: 83784
Other names: Burkholderia sartisoli, Burkholderia sartisoli Vanlaere et al. 2008, Burkholderia sp. LMG 22948, Burkholderia sp. R-701, Burkholderia sp. RG6-9, Burkholderia sp. RP007, CCUG 53604, ICMP 13529, LMG 24000, LMG:24000, P. sartisoli, Paraburkholderia sartisoli (Vanlaere et al. 2008) Sawana et al. 2015, strain RP 007, strain RP007
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