STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA55681.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
SEA55634.1
MoxR-like ATPase.
 
    0.885
SEA55699.1
Benzoate membrane transport protein.
       0.671
SEA55657.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.640
SEA10256.1
Hypothetical protein.
  
     0.582
SEA22061.1
Hypothetical protein.
  
     0.561
SEA99541.1
MoxR-like ATPase.
 
    0.532
SEA55614.1
Cytochrome c553.
 
     0.403
SEA41578.1
butyryl-CoA dehydrogenase/acyl-CoA dehydrogenase.
  
     0.400
Your Current Organism:
Paraburkholderia sartisoli
NCBI taxonomy Id: 83784
Other names: Burkholderia sartisoli, Burkholderia sartisoli Vanlaere et al. 2008, Burkholderia sp. LMG 22948, Burkholderia sp. R-701, Burkholderia sp. RG6-9, Burkholderia sp. RP007, CCUG 53604, ICMP 13529, LMG 24000, LMG:24000, P. sartisoli, Paraburkholderia sartisoli (Vanlaere et al. 2008) Sawana et al. 2015, strain RP 007, strain RP007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.