STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA61209.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
SEA99520.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.828
SEA29025.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.827
SEA99493.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.822
SEA28943.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.814
SEA99554.1
Hypothetical protein.
 
     0.782
SEA99541.1
MoxR-like ATPase.
 
     0.757
ubiX-2
4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.737
SEA61231.1
UbiD family decarboxylase; Belongs to the UbiD family.
       0.501
SEA61161.1
MFS transporter, putative metabolite:H+ symporter.
       0.478
SEA91088.1
Nitrile hydratase.
  
     0.461
Your Current Organism:
Paraburkholderia sartisoli
NCBI taxonomy Id: 83784
Other names: Burkholderia sartisoli, Burkholderia sartisoli Vanlaere et al. 2008, Burkholderia sp. LMG 22948, Burkholderia sp. R-701, Burkholderia sp. RG6-9, Burkholderia sp. RP007, CCUG 53604, ICMP 13529, LMG 24000, LMG:24000, P. sartisoli, Paraburkholderia sartisoli (Vanlaere et al. 2008) Sawana et al. 2015, strain RP 007, strain RP007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.