Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA10170.1 | SEB00295.1 | SAMN05192564_101279 | SAMN05192564_10553 | Dihydroneopterin triphosphate pyrophosphatase. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.907 |
SEA10170.1 | folE | SAMN05192564_101279 | SAMN05192564_11364 | Dihydroneopterin triphosphate pyrophosphatase. | GTP cyclohydrolase I. | 0.955 |
SEA10170.1 | folE2 | SAMN05192564_101279 | SAMN05192564_108140 | Dihydroneopterin triphosphate pyrophosphatase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.957 |
SEA77417.1 | SEB00295.1 | SAMN05192564_1038 | SAMN05192564_10553 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.833 |
SEB00295.1 | SEA10170.1 | SAMN05192564_10553 | SAMN05192564_101279 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Dihydroneopterin triphosphate pyrophosphatase. | 0.907 |
SEB00295.1 | SEA77417.1 | SAMN05192564_10553 | SAMN05192564_1038 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.833 |
SEB00295.1 | SEB10306.1 | SAMN05192564_10553 | SAMN05192564_106124 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Thioredoxin reductase (NADPH). | 0.879 |
SEB00295.1 | SEB13401.1 | SAMN05192564_10553 | SAMN05192564_106385 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Transcriptional regulator, Crp/Fnr family. | 0.833 |
SEB00295.1 | SEB16583.1 | SAMN05192564_10553 | SAMN05192564_107196 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Sulfate permease, SulP family. | 0.837 |
SEB00295.1 | folE | SAMN05192564_10553 | SAMN05192564_11364 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | GTP cyclohydrolase I. | 0.974 |
SEB00295.1 | folE2 | SAMN05192564_10553 | SAMN05192564_108140 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.964 |
SEB00295.1 | queC | SAMN05192564_10553 | SAMN05192564_10555 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.975 |
SEB00295.1 | queE | SAMN05192564_10553 | SAMN05192564_10554 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.999 |
SEB00295.1 | queF | SAMN05192564_10553 | SAMN05192564_101265 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.910 |
SEB10306.1 | SEB00295.1 | SAMN05192564_106124 | SAMN05192564_10553 | Thioredoxin reductase (NADPH). | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.879 |
SEB10306.1 | SEB16583.1 | SAMN05192564_106124 | SAMN05192564_107196 | Thioredoxin reductase (NADPH). | Sulfate permease, SulP family. | 0.688 |
SEB13401.1 | SEB00295.1 | SAMN05192564_106385 | SAMN05192564_10553 | Transcriptional regulator, Crp/Fnr family. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.833 |
SEB16583.1 | SEB00295.1 | SAMN05192564_107196 | SAMN05192564_10553 | Sulfate permease, SulP family. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.837 |
SEB16583.1 | SEB10306.1 | SAMN05192564_107196 | SAMN05192564_106124 | Sulfate permease, SulP family. | Thioredoxin reductase (NADPH). | 0.688 |
folE | SEA10170.1 | SAMN05192564_11364 | SAMN05192564_101279 | GTP cyclohydrolase I. | Dihydroneopterin triphosphate pyrophosphatase. | 0.955 |
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