STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB16676.1Phosphoserine phosphatase. (354 aa)    
Predicted Functional Partners:
SEB16684.1
Arylsulfatase.
 
     0.895
SEB16671.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.845
SEA41598.1
Uncharacterized conserved protein.
  
     0.764
SEB05666.1
Uncharacterized conserved protein.
  
     0.764
SEB16648.1
Protein of unknown function.
 
     0.763
SEA41527.1
Uncharacterized conserved protein.
  
     0.756
SEA97014.1
Uncharacterized conserved protein.
  
     0.748
SEB19129.1
Uncharacterized conserved protein.
  
     0.746
SEA96589.1
Uncharacterized conserved protein.
  
     0.745
SEB16622.1
Oxygen tolerance.
 
     0.740
Your Current Organism:
Paraburkholderia sartisoli
NCBI taxonomy Id: 83784
Other names: Burkholderia sartisoli, Burkholderia sartisoli Vanlaere et al. 2008, Burkholderia sp. LMG 22948, Burkholderia sp. R-701, Burkholderia sp. RG6-9, Burkholderia sp. RP007, CCUG 53604, ICMP 13529, LMG 24000, LMG:24000, P. sartisoli, Paraburkholderia sartisoli (Vanlaere et al. 2008) Sawana et al. 2015, strain RP 007, strain RP007
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.