Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB22462.1 | SEB22466.1 | SAMN05192564_110118 | SAMN05192564_110119 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.435 |
SEB22466.1 | SEB22462.1 | SAMN05192564_110119 | SAMN05192564_110118 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.435 |
SEB22466.1 | SEB22471.1 | SAMN05192564_110119 | SAMN05192564_110120 | Hypothetical protein. | Xaa-Pro aminopeptidase. | 0.703 |
SEB22466.1 | SEB22478.1 | SAMN05192564_110119 | SAMN05192564_110121 | Hypothetical protein. | 2-haloacid dehalogenase. | 0.497 |
SEB22471.1 | SEB22466.1 | SAMN05192564_110120 | SAMN05192564_110119 | Xaa-Pro aminopeptidase. | Hypothetical protein. | 0.703 |
SEB22471.1 | SEB22478.1 | SAMN05192564_110120 | SAMN05192564_110121 | Xaa-Pro aminopeptidase. | 2-haloacid dehalogenase. | 0.556 |
SEB22478.1 | SEB22466.1 | SAMN05192564_110121 | SAMN05192564_110119 | 2-haloacid dehalogenase. | Hypothetical protein. | 0.497 |
SEB22478.1 | SEB22471.1 | SAMN05192564_110121 | SAMN05192564_110120 | 2-haloacid dehalogenase. | Xaa-Pro aminopeptidase. | 0.556 |