Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOP53221.1 | KOP53222.1 | OX88_21420 | OX88_21430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
KOP53221.1 | KOP53241.1 | OX88_21420 | OX88_21425 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | 0.701 |
KOP53222.1 | KOP53221.1 | OX88_21430 | OX88_21420 | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.458 |
KOP53222.1 | KOP53223.1 | OX88_21430 | OX88_21435 | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.509 |
KOP53222.1 | KOP53241.1 | OX88_21430 | OX88_21425 | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | 0.499 |
KOP53222.1 | coaD | OX88_21430 | OX88_19880 | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.444 |
KOP53222.1 | coaX | OX88_21430 | OX88_23785 | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.508 |
KOP53223.1 | KOP53222.1 | OX88_21435 | OX88_21430 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.509 |
KOP53241.1 | KOP53221.1 | OX88_21425 | OX88_21420 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.701 |
KOP53241.1 | KOP53222.1 | OX88_21425 | OX88_21430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
coaD | KOP53222.1 | OX88_19880 | OX88_21430 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
coaD | coaX | OX88_19880 | OX88_23785 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.816 |
coaX | KOP53222.1 | OX88_23785 | OX88_21430 | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.508 |
coaX | coaD | OX88_23785 | OX88_19880 | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.816 |