STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL94097.1Putative protein DUF2230. (369 aa)    
Predicted Functional Partners:
hgdC1
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC.
   
 0.966
AKL94096.1
Putative protein DUF2229.
   
0.920
hgdC2
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC.
   
 0.857
AKL96388.1
CoA-substrate-specific enzyme activase.
 
   
 0.700
hgdC4
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC.
 
   
 0.689
AKL94095.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
    0.614
hgdC3
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC.
   
 0.551
AKL97337.1
Peptidase MA superfamily.
  
     0.433
ytxC
Sporulation protein YtxC.
  
     0.422
AKL94245.1
Hypothetical protein.
 
   
0.420
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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