Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKL95113.1Transcriptional attenuator, LytR family. (382 aa)    
Predicted Functional Partners:
AKL95112.1
Metal dependent phosphohydrolase.
 
    0.774
tagO
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO.
 
  
 0.644
AKL96759.1
Polysaccharide pyruvyl transferase.
 
   
 0.591
nadD
Nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
     
 0.568
tagA
N-acetylmannosaminyltransferase TagA; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
   
 0.540
AKL96760.1
Hypothetical protein.
 
     0.498
AKL93679.1
S-layer domain containing protein.
  
     0.486
rsfS
Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.454
AKL95114.1
K+-dependent Na+/Ca+ exchanger like-protein.
       0.443
AKL95189.1
S-layer domain containing protein.
  
     0.420
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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