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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL95357.1Nitroreductase. (179 aa)    
Predicted Functional Partners:
AKL96544.1
ABC-type multidrug transport system, permease component.
  
  
 0.645
birA
biotin--acetyl-CoA-carboxylase ligase BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.612
gloA
Lactoylglutathione lyase GloA.
  
  
 0.593
AKL96105.1
ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.565
AKL94283.1
Putative NAD(FAD)-dependent dehydrogenase.
     
 0.501
AKL96996.1
Lactoylglutathione lyase.
  
  
 0.495
tadA
tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.477
AKL95164.1
ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.474
AKL96071.1
ABC transporter permease protein.
  
  
 0.474
AKL96543.1
ABC-type multidrug transport system, permease component.
  
  
 0.474
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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