STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yheDEndospore coat-associated protein YheD. (914 aa)    
Predicted Functional Partners:
AKL97255.1
Copper amine oxidase.
  
     0.601
AKL96987.1
Aspartyl protease.
  
     0.596
AKL93611.1
Sporulation protein.
  
     0.586
AKL94028.1
ABC-type Co2 transport system permease component-like protein.
  
     0.471
AKL96779.1
Hypothetical protein.
  
     0.451
lonB
Sporulation protease LonB.
  
     0.412
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.