STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL95361.1Putative protein DUF2088. (425 aa)    
Predicted Functional Partners:
glcD2
Glycolate oxidase subunit GlcD.
 
  
 0.955
AKL97179.1
etfB electron transfer flavoprotein beta subunit.
    
 0.936
etfA2
Electron transfer flavoprotein alpha subunit.
    
 0.933
AKL96261.1
Hypothetical protein.
  
  
 
0.920
AKL95186.1
Zn-dependent hydrolase.
     
 0.913
AKL93927.1
Zn-dependent hydrolase.
     
 0.903
purE2
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase PurE.
 
  
 0.891
AKL94051.1
Putative protein ExsB family.
 
  
 0.787
AKL94857.1
Hypothetical protein.
 
  
 0.774
larC
Putative protein UPF0272; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.713
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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