Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKL95364.1Fe-S oxidoreductase. (500 aa)    
Predicted Functional Partners:
AKL95365.1
Fe-S oxidoreductase.
 
  
 
0.984
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
  0.977
AKL95366.1
O-methyltransferase.
 
     0.945
thiC1
Phosphomethylpyrimidine synthase ThiC.
       0.601
AKL94311.1
Single-strand binding protein/primosomal replication protein n.
   
    0.578
mtrH
Tetrahydromethanopterin S-methyltransferase subunit H.
  
     0.516
pdxA2
4-hydroxythreonine-4-phosphate dehydrogenase PdxA; Belongs to the PdxA family.
       0.416
AKL95363.1
Hypothetical protein.
       0.416
AKL96894.1
Transcriptional regulator AraC family.
  
     0.409
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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