STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL95378.1Spore germination B3 GerAC family protein. (371 aa)    
Predicted Functional Partners:
AKL95377.1
Spore germination protein.
 
  
 0.950
gerKA4
Spore germination protein KA.
 
  
 0.926
gerKB1
Spore germination protein KB.
 
  
 0.764
gerKA1
Spore germination protein KA.
 
  
 0.748
gerLB2
Spore germination protein GerLB.
 
  
 0.716
AKL94208.1
Ion channel.
  
     0.713
AKL97094.1
Hypothetical protein.
  
     0.712
gerLB1
Spore germination protein GerLB.
 
  
 0.704
AKL94028.1
ABC-type Co2 transport system permease component-like protein.
  
     0.679
AKL94157.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.674
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.