STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL95407.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
ytqB
rRNA methylase YtqB.
       0.742
rluB
Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
       0.483
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
  
    0.430
pycB
Pyruvate carboxylase subunit B.
       0.418
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
   0.412
prpC
Protein phosphatase PrpC.
    
   0.406
AKL95597.1
Hypothetical protein.
    
   0.406
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.