Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKL94715.1 | AKL95799.1 | CACET_c12500 | CACET_c23530 | Helicase domain-containing protein. | HIT-like protein. | 0.570 |
AKL94715.1 | nifJ2 | CACET_c12500 | CACET_c37600 | Helicase domain-containing protein. | Pyruvate-flavodoxin oxidoreductase NifJ. | 0.688 |
AKL95797.1 | AKL95799.1 | CACET_c23510 | CACET_c23530 | Hypothetical protein. | HIT-like protein. | 0.623 |
AKL95797.1 | AKL95800.1 | CACET_c23510 | CACET_c23540 | Hypothetical protein. | RNA modification enzyme MiaB family. | 0.551 |
AKL95797.1 | dnaJ1 | CACET_c23510 | CACET_c23570 | Hypothetical protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.463 |
AKL95797.1 | prmA | CACET_c23510 | CACET_c23560 | Hypothetical protein. | Ribosomal protein L11 methyltransferase PrmA; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.616 |
AKL95797.1 | rpsU | CACET_c23510 | CACET_c23520 | Hypothetical protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.970 |
AKL95797.1 | rsmE | CACET_c23510 | CACET_c23550 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.577 |
AKL95797.1 | ybeY | CACET_c23510 | CACET_c23420 | Hypothetical protein. | rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.439 |
AKL95799.1 | AKL94715.1 | CACET_c23530 | CACET_c12500 | HIT-like protein. | Helicase domain-containing protein. | 0.570 |
AKL95799.1 | AKL95797.1 | CACET_c23530 | CACET_c23510 | HIT-like protein. | Hypothetical protein. | 0.623 |
AKL95799.1 | AKL95800.1 | CACET_c23530 | CACET_c23540 | HIT-like protein. | RNA modification enzyme MiaB family. | 0.715 |
AKL95799.1 | dnaJ1 | CACET_c23530 | CACET_c23570 | HIT-like protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.587 |
AKL95799.1 | grpE | CACET_c23530 | CACET_c23590 | HIT-like protein. | Co-chaperone protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of AT [...] | 0.590 |
AKL95799.1 | nifJ2 | CACET_c23530 | CACET_c37600 | HIT-like protein. | Pyruvate-flavodoxin oxidoreductase NifJ. | 0.609 |
AKL95799.1 | prmA | CACET_c23530 | CACET_c23560 | HIT-like protein. | Ribosomal protein L11 methyltransferase PrmA; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.694 |
AKL95799.1 | rpsU | CACET_c23530 | CACET_c23520 | HIT-like protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.663 |
AKL95799.1 | rsmE | CACET_c23530 | CACET_c23550 | HIT-like protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.695 |
AKL95799.1 | ybeY | CACET_c23530 | CACET_c23420 | HIT-like protein. | rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.595 |
AKL95800.1 | AKL95797.1 | CACET_c23540 | CACET_c23510 | RNA modification enzyme MiaB family. | Hypothetical protein. | 0.551 |
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