STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL96145.1Bacteriophage portal protein, SPP1 Gp6-lik. (421 aa)    
Predicted Functional Partners:
AKL96144.1
Putative phage head morphogenesis protein SPP1 gp7 family.
 
     0.952
AKL96154.1
Hypothetical protein.
 
  
 0.861
AKL96149.1
Hypothetical protein.
 
     0.843
AKL96143.1
Hypothetical protein.
       0.737
AKL95984.1
Hypothetical protein.
  
     0.577
AKL94089.1
Hypothetical protein.
  
     0.575
AKL94948.1
Hypothetical protein.
  
     0.571
AKL94364.1
S-layer domain containing protein.
  
     0.563
gerKB2
Spore germination protein KB.
  
     0.544
argB1
Acetylglutamate kinase ArgB.
  
     0.538
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.