Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKL96967.1 | AKL96968.1 | CACET_c35360 | CACET_c35370 | Amidohydrolase. | Hypothetical protein. | 0.782 |
AKL96967.1 | dapH2 | CACET_c35360 | CACET_c09750 | Amidohydrolase. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase DapH; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.434 |
AKL96967.1 | spmA2 | CACET_c35360 | CACET_c35390 | Amidohydrolase. | Spore maturation protein A. | 0.485 |
AKL96967.1 | spmB2 | CACET_c35360 | CACET_c35380 | Amidohydrolase. | Spore maturation protein B. | 0.499 |
AKL96968.1 | AKL96967.1 | CACET_c35370 | CACET_c35360 | Hypothetical protein. | Amidohydrolase. | 0.782 |
AKL96968.1 | spmA2 | CACET_c35370 | CACET_c35390 | Hypothetical protein. | Spore maturation protein A. | 0.509 |
AKL96968.1 | spmB2 | CACET_c35370 | CACET_c35380 | Hypothetical protein. | Spore maturation protein B. | 0.518 |
dapH2 | AKL96967.1 | CACET_c09750 | CACET_c35360 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase DapH; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | Amidohydrolase. | 0.434 |
spmA2 | AKL96967.1 | CACET_c35390 | CACET_c35360 | Spore maturation protein A. | Amidohydrolase. | 0.485 |
spmA2 | AKL96968.1 | CACET_c35390 | CACET_c35370 | Spore maturation protein A. | Hypothetical protein. | 0.509 |
spmA2 | spmB2 | CACET_c35390 | CACET_c35380 | Spore maturation protein A. | Spore maturation protein B. | 0.998 |
spmB2 | AKL96967.1 | CACET_c35380 | CACET_c35360 | Spore maturation protein B. | Amidohydrolase. | 0.499 |
spmB2 | AKL96968.1 | CACET_c35380 | CACET_c35370 | Spore maturation protein B. | Hypothetical protein. | 0.518 |
spmB2 | spmA2 | CACET_c35380 | CACET_c35390 | Spore maturation protein B. | Spore maturation protein A. | 0.998 |