STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO10963.1Serine protein kinase PrkA. (640 aa)    
Predicted Functional Partners:
CUO10858.1
Stage V sporulation protein R.
 
  
 0.995
yhbH
Sporulation protein YhbH; Belongs to the UPF0229 family.
 
  
 0.995
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.783
glgA_2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.721
ytbE
2%2C5-didehydrogluconate reductase.
   
    0.640
yvgN
Aldo/keto reductase.
   
    0.640
rubY
Rubrerythrin.
       0.596
CUO10671.1
Uncharacterised protein.
       0.559
recQ1
Putative ATP-dependent DNA helicase RecQ.
       0.534
CUO10710.1
CaCA family calcium/proton antiporter.
       0.480
Your Current Organism:
Clostridium disporicum
NCBI taxonomy Id: 84024
Other names: ATCC 43838, C. disporicum, DSM 5521, NCIB 12424, NCIB:12424, NCIMB 12424
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