STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhF_3ABC-type multidrug transport system%2C ATPase component. (295 aa)    
Predicted Functional Partners:
CUO22349.1
ABC transporter permease.
 
 0.990
CUO22432.1
ABC transporter permease.
 
 0.893
ecfA1
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
0.825
CUO10034.1
ABC transporter permease.
  
 0.787
CUO22235.1
Response regulator receiver protein.
  
    0.782
CUO22276.1
Uncharacterised protein.
       0.773
CUO22394.1
ABC transporter.
 
 
 
0.699
artM_2
ABC transporter ATP-binding protein.
 
 
 0.663
yhhJ
Drug resistance ABC-2 type transporter permease.
  
 
 0.657
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.655
Your Current Organism:
Clostridium disporicum
NCBI taxonomy Id: 84024
Other names: ATCC 43838, C. disporicum, DSM 5521, NCIB 12424, NCIB:12424, NCIMB 12424
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