STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ganPPutative arabinogalactan oligomer transport system permease protein GanP. (695 aa)    
Predicted Functional Partners:
malG
Maltose:maltodextrin transport system permease.
 
 0.999
ugpC_4
ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.994
malX
Maltose/maltodextrin-binding protein precursor.
 
 0.989
ugpC_3
Maltose ABC transporter.
 
 0.975
ugpC_2
ABC transporter ATP-binding protein.
 
 0.952
ugpC_1
Carbohydrate uptake ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.950
ycjP_3
Sugar ABC transporter permease.
 
 0.931
ycjP_2
Sugar ABC transporter permease.
 
 0.926
ycjP_1
Carbohydrate uptake ABC transporter permease.
 
 0.921
ycjP_6
Carbohydrate uptake ABC transporter permease.
 
 0.920
Your Current Organism:
Clostridium disporicum
NCBI taxonomy Id: 84024
Other names: ATCC 43838, C. disporicum, DSM 5521, NCIB 12424, NCIB:12424, NCIMB 12424
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