Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOL84867.1 | esxA_1 | CROST_39030 | CROST_00510 | Hypothetical protein. | Virulence factor EsxA; Belongs to the WXG100 family. | 0.647 |
eccCa1_1 | esxA_1 | CROST_00940 | CROST_00510 | ESX-1 secretion system protein EccCa1. | Virulence factor EsxA; Belongs to the WXG100 family. | 0.560 |
eccCa1_1 | ftsK | CROST_00940 | CROST_35330 | ESX-1 secretion system protein EccCa1. | DNA translocase FtsK. | 0.484 |
eccCa1_2 | esxA_1 | CROST_15370 | CROST_00510 | ESX-1 secretion system protein EccCa1. | Virulence factor EsxA; Belongs to the WXG100 family. | 0.633 |
eccCa1_3 | esxA_1 | CROST_38910 | CROST_00510 | ESX-1 secretion system protein EccCa1. | Virulence factor EsxA; Belongs to the WXG100 family. | 0.633 |
esxA_1 | OOL84867.1 | CROST_00510 | CROST_39030 | Virulence factor EsxA; Belongs to the WXG100 family. | Hypothetical protein. | 0.647 |
esxA_1 | eccCa1_1 | CROST_00510 | CROST_00940 | Virulence factor EsxA; Belongs to the WXG100 family. | ESX-1 secretion system protein EccCa1. | 0.560 |
esxA_1 | eccCa1_2 | CROST_00510 | CROST_15370 | Virulence factor EsxA; Belongs to the WXG100 family. | ESX-1 secretion system protein EccCa1. | 0.633 |
esxA_1 | eccCa1_3 | CROST_00510 | CROST_38910 | Virulence factor EsxA; Belongs to the WXG100 family. | ESX-1 secretion system protein EccCa1. | 0.633 |
esxA_1 | ftsK | CROST_00510 | CROST_35330 | Virulence factor EsxA; Belongs to the WXG100 family. | DNA translocase FtsK. | 0.560 |
esxA_1 | spoIIIE | CROST_00510 | CROST_25770 | Virulence factor EsxA; Belongs to the WXG100 family. | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | 0.560 |
ftsK | eccCa1_1 | CROST_35330 | CROST_00940 | DNA translocase FtsK. | ESX-1 secretion system protein EccCa1. | 0.484 |
ftsK | esxA_1 | CROST_35330 | CROST_00510 | DNA translocase FtsK. | Virulence factor EsxA; Belongs to the WXG100 family. | 0.560 |
spoIIIE | esxA_1 | CROST_25770 | CROST_00510 | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | Virulence factor EsxA; Belongs to the WXG100 family. | 0.560 |