STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOL88663.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
ulaE
L-ribulose-5-phosphate 3-epimerase UlaE.
 
     0.945
ulaG
Putative L-ascorbate-6-phosphate lactonase UlaG.
 
     0.941
ulaB
Ascorbate-specific phosphotransferase enzyme IIB component.
 
     0.840
ulaA
Ascorbate-specific permease IIC component UlaA.
 
     0.833
ulaF
L-ribulose-5-phosphate 4-epimerase UlaF.
 
     0.794
tktA
Transketolase 1.
       0.701
dxs_1
1-deoxy-D-xylulose-5-phosphate synthase.
       0.676
tal_1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
       0.633
ulaC
Ascorbate-specific phosphotransferase enzyme IIA component.
 
     0.570
hxlA
3-hexulose-6-phosphate synthase.
 
     0.506
Your Current Organism:
Clostridium roseum
NCBI taxonomy Id: 84029
Other names: ATCC 17797, C. roseum, DSM 7320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.