Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOL85418.1 | OOL86951.1 | CROST_34940 | CROST_25510 | Hypothetical protein. | Hypothetical protein. | 0.444 |
OOL85418.1 | OOL93197.1 | CROST_34940 | CROST_03330 | Hypothetical protein. | Hypothetical protein. | 0.444 |
OOL86951.1 | OOL85418.1 | CROST_25510 | CROST_34940 | Hypothetical protein. | Hypothetical protein. | 0.444 |
OOL86951.1 | OOL87665.1 | CROST_25510 | CROST_20410 | Hypothetical protein. | Hypothetical protein. | 0.638 |
OOL86951.1 | OOL89391.1 | CROST_25510 | CROST_12590 | Hypothetical protein. | Hypothetical protein. | 0.444 |
OOL86951.1 | OOL93197.1 | CROST_25510 | CROST_03330 | Hypothetical protein. | Hypothetical protein. | 0.601 |
OOL86951.1 | miaB_2 | CROST_25510 | CROST_25520 | Hypothetical protein. | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.508 |
OOL86951.1 | mutL | CROST_25510 | CROST_25540 | Hypothetical protein. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.425 |
OOL86951.1 | mutS_3 | CROST_25510 | CROST_25530 | Hypothetical protein. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.451 |
OOL86951.1 | ribBA | CROST_25510 | CROST_30860 | Hypothetical protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.673 |
OOL87665.1 | OOL86951.1 | CROST_20410 | CROST_25510 | Hypothetical protein. | Hypothetical protein. | 0.638 |
OOL87665.1 | OOL89391.1 | CROST_20410 | CROST_12590 | Hypothetical protein. | Hypothetical protein. | 0.406 |
OOL87665.1 | ribBA | CROST_20410 | CROST_30860 | Hypothetical protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.443 |
OOL89391.1 | OOL86951.1 | CROST_12590 | CROST_25510 | Hypothetical protein. | Hypothetical protein. | 0.444 |
OOL89391.1 | OOL87665.1 | CROST_12590 | CROST_20410 | Hypothetical protein. | Hypothetical protein. | 0.406 |
OOL89391.1 | ribBA | CROST_12590 | CROST_30860 | Hypothetical protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.414 |
OOL93197.1 | OOL85418.1 | CROST_03330 | CROST_34940 | Hypothetical protein. | Hypothetical protein. | 0.444 |
OOL93197.1 | OOL86951.1 | CROST_03330 | CROST_25510 | Hypothetical protein. | Hypothetical protein. | 0.601 |
miaB_2 | OOL86951.1 | CROST_25520 | CROST_25510 | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Hypothetical protein. | 0.508 |
miaB_2 | mutL | CROST_25520 | CROST_25540 | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.774 |
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