Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOL86109.1 | OOL86110.1 | CROST_29350 | CROST_29360 | Anaerobic benzoate catabolism transcriptional regulator. | Hypothetical protein. | 0.831 |
OOL86109.1 | OOL86111.1 | CROST_29350 | CROST_29370 | Anaerobic benzoate catabolism transcriptional regulator. | Hypothetical protein. | 0.482 |
OOL86110.1 | OOL86109.1 | CROST_29360 | CROST_29350 | Hypothetical protein. | Anaerobic benzoate catabolism transcriptional regulator. | 0.831 |
OOL86110.1 | OOL86111.1 | CROST_29360 | CROST_29370 | Hypothetical protein. | Hypothetical protein. | 0.482 |
OOL86111.1 | OOL86109.1 | CROST_29370 | CROST_29350 | Hypothetical protein. | Anaerobic benzoate catabolism transcriptional regulator. | 0.482 |
OOL86111.1 | OOL86110.1 | CROST_29370 | CROST_29360 | Hypothetical protein. | Hypothetical protein. | 0.482 |
OOL86111.1 | cdr | CROST_29370 | CROST_23220 | Hypothetical protein. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.590 |
OOL86111.1 | nasF | CROST_29370 | CROST_26960 | Hypothetical protein. | uroporphyrinogen-III C-methyltransferase. | 0.768 |
OOL86111.1 | yrrB_4 | CROST_29370 | CROST_15450 | Hypothetical protein. | TPR repeat-containing protein YrrB. | 0.400 |
cdr | OOL86111.1 | CROST_23220 | CROST_29370 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein. | 0.590 |
cdr | nasF | CROST_23220 | CROST_26960 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | uroporphyrinogen-III C-methyltransferase. | 0.960 |
cdr | yrrB_4 | CROST_23220 | CROST_15450 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | TPR repeat-containing protein YrrB. | 0.598 |
nasF | OOL86111.1 | CROST_26960 | CROST_29370 | uroporphyrinogen-III C-methyltransferase. | Hypothetical protein. | 0.768 |
nasF | cdr | CROST_26960 | CROST_23220 | uroporphyrinogen-III C-methyltransferase. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.960 |
yrrB_4 | OOL86111.1 | CROST_15450 | CROST_29370 | TPR repeat-containing protein YrrB. | Hypothetical protein. | 0.400 |
yrrB_4 | cdr | CROST_15450 | CROST_23220 | TPR repeat-containing protein YrrB. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.598 |