STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOL85897.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
OOL85896.1
Hypothetical protein.
       0.732
OOL85898.1
Hypothetical protein.
       0.655
OOL85895.1
Hypothetical protein.
       0.612
OOL85894.1
Hypothetical protein.
       0.592
OOL85899.1
Hypothetical protein.
       0.580
OOL85893.1
Hypothetical protein.
       0.529
OOL85892.1
Hypothetical protein.
       0.495
OOL85891.1
Hypothetical protein.
       0.489
OOL85888.1
Hypothetical protein.
       0.474
OOL85889.1
Hypothetical protein.
       0.474
Your Current Organism:
Clostridium roseum
NCBI taxonomy Id: 84029
Other names: ATCC 17797, C. roseum, DSM 7320
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.