STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOL85899.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
OOL85898.1
Hypothetical protein.
       0.682
OOL85900.1
Hypothetical protein.
       0.596
OOL85897.1
Hypothetical protein.
       0.580
OOL85901.1
Hypothetical protein.
       0.580
OOL85896.1
Hypothetical protein.
       0.551
OOL85902.1
Hypothetical protein.
       0.545
OOL85903.1
Hypothetical protein.
       0.545
OOL85904.1
Hypothetical protein.
       0.528
OOL85905.1
Hypothetical protein.
       0.528
OOL85906.1
Hypothetical protein.
       0.518
Your Current Organism:
Clostridium roseum
NCBI taxonomy Id: 84029
Other names: ATCC 17797, C. roseum, DSM 7320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.