STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOL85411.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
    0.772
dppC
Dipeptide transport system permease protein DppC.
 
 0.744
oppC_4
Oligopeptide transport system permease protein OppC.
 
 0.742
dppB_2
Dipeptide transport system permease protein DppB.
 
 0.729
dppB_3
Dipeptide transport system permease protein DppB.
 
 0.727
oppC_1
Oligopeptide transport system permease protein OppC.
  
 0.704
oppC_2
Oligopeptide transport system permease protein OppC.
  
 0.704
oppC_3
Oligopeptide transport system permease protein OppC.
  
 0.704
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
    0.690
dppB_1
Dipeptide transport system permease protein DppB.
  
 0.689
Your Current Organism:
Clostridium roseum
NCBI taxonomy Id: 84029
Other names: ATCC 17797, C. roseum, DSM 7320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.