STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI94135.1Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. (306 aa)    
Predicted Functional Partners:
SEI94112.1
Zinc transport system ATP-binding protein.
 
 
 0.993
SEI94086.1
Zinc transport system permease protein.
 
 0.989
SEJ85668.1
Zinc transport system permease protein.
 
 0.977
SEJ85681.1
Zinc transport system ATP-binding protein.
 
 
 0.833
rpmB
Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.692
SEJ30569.1
Iron complex transport system ATP-binding protein.
 
 
 0.663
SEJ42263.1
Iron complex transport system ATP-binding protein.
 
 
 0.661
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
 0.626
SEJ42395.1
Putative iron-only hydrogenase system regulator.
  
 
 0.615
SEJ77325.1
Iron complex transport system ATP-binding protein.
  
 
 0.615
Your Current Organism:
Propionispira arboris
NCBI taxonomy Id: 84035
Other names: ATCC 33732, DSM 2179, P. arboris, strain 12B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.