STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ51465.1Cobalt/nickel transport system permease protein. (316 aa)    
Predicted Functional Partners:
SEJ51501.1
Cobalt/nickel transport system permease protein.
 0.999
SEJ51440.1
Cobalt/nickel transport system ATP-binding protein.
 
 0.998
SEJ51483.1
Cobalt/nickel transport protein.
 
 0.998
SEJ25376.1
Energy-coupling factor transport system ATP-binding protein.
 
 0.984
SEJ25348.1
Energy-coupling factor transport system ATP-binding protein.
  
 0.982
SEJ47606.1
Uncharacterized membrane protein.
  
 0.971
SEJ22235.1
ECF transporter S component, folate family.
  
 0.937
SEJ50982.1
Biotin transport system substrate-specific component.
  
 0.937
SEJ73631.1
Biotin transport system substrate-specific component.
  
 0.937
SEJ97183.1
Biotin transport system substrate-specific component.
  
 0.937
Your Current Organism:
Propionispira arboris
NCBI taxonomy Id: 84035
Other names: ATCC 33732, DSM 2179, P. arboris, strain 12B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.