STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ60066.1Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation. Belongs to the RecU family. (150 aa)    
Predicted Functional Partners:
SEJ60079.1
Hypothetical protein.
       0.693
SEJ12608.1
single-stranded-DNA-specific exonuclease.
   
  
 0.660
SEI96467.1
Hypothetical protein.
  
     0.544
SEJ60093.1
Hypothetical protein.
       0.533
SEJ60107.1
Hypothetical protein.
       0.498
SEJ59934.1
Hypothetical protein.
 
     0.487
SEJ60053.1
Hypothetical protein.
       0.484
SEI99729.1
Hypothetical protein.
  
     0.468
SEJ09029.1
PTS system, sucrose-specific IIC component.
   
  
 0.417
SEJ46180.1
PTS system, arbutin-like IIC component.
   
  
 0.417
Your Current Organism:
Propionispira arboris
NCBI taxonomy Id: 84035
Other names: ATCC 33732, DSM 2179, P. arboris, strain 12B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.