STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ59802.1Voltage-gated potassium channel. (257 aa)    
Predicted Functional Partners:
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.779
SEJ58603.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.654
SEI98758.1
L-seryl-tRNA(Ser) seleniumtransferase.
   
    0.619
SEJ84725.1
L-seryl-tRNA(Ser) seleniumtransferase.
   
    0.619
SEJ79451.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.609
SEI83733.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.583
SEI84283.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
 0.581
SEI84323.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
 0.581
SEI84851.1
Glycosyltransferase family 92.
   
 
 0.581
SEJ79488.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
 0.581
Your Current Organism:
Propionispira arboris
NCBI taxonomy Id: 84035
Other names: ATCC 33732, DSM 2179, P. arboris, strain 12B4
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